Dr Shi Wei Chen
Postdoctoral Research Fellow
School of Agriculture and Food Sustainability
+61 7 334 67865
Publications
Journal Articles
Chen, Andrew, Le, Duy P., Smith, Linda J., Kafle, Dinesh, Aitken, Elizabeth A. B. and Gardiner, Donald M. (2024). Assessing the Pathogenicity of Berkeleyomyces rouxiae and Fusarium oxysporum f. sp. vasinfectum on Cotton (Gossypium hirsutum) Using a Rapid and Robust Seedling Screening Method. Journal of Fungi, 10 (10) 715, 715. doi: 10.3390/jof10100715
Chen, Andrew, Morrison, Sabrina, Gregson, Aphrika, Le, Duy P., Urquhart, Andrew S., Smith, Linda J., Aitken, Elizabeth A. B. and Gardiner, Donald M. (2024). Fluorescently Tagged Verticillium dahliae to Understand the Infection Process on Cotton (Gossypium hirsutum) and Weed Plant Species. Pathogens, 13 (6) 442, 442. doi: 10.3390/pathogens13060442
Matthews, Andrea, Muthukumar, Sharan P. T., Hamill, Sharon, Aitken, Elizabeth A. B. and Chen, Andrew (2023). Impact of inoculum density of Fusarium oxysporum f. sp. zingiberi on symptomatic appearances and yield of ginger (Zingiber officinale Roscoe). Access Microbiology, 5 (9), 1-16. doi: 10.1099/acmi.0.000605.v3
Chen, Andrew, Sun, Jiaman, Viljoen, Altus, Mostert, Diane, Xie, Yucong, Mangila, Leroy, Bothma, Sheryl, Lyons, Rebecca, Hřibová, Eva, Christelová, Pavla, Uwimana, Brigitte, Amah, Delphine, Pearce, Stephen, Chen, Ning, Batley, Jacqueline, Edwards, David, Doležel, Jaroslav, Crisp, Peter, Brown, Allan F., Martin, Guillaume, Yahiaoui, Nabila, D’Hont, Angelique, Coin, Lachlan, Swennen, Rony and Aitken, Elizabeth A. B. (2023). Genetic mapping, candidate gene identification and marker validation for host plant resistance to the race 4 of Fusarium oxysporum f. sp. cubense using Musa acuminata ssp. malaccensis. Pathogens, 12 (6) 820, 820. doi: 10.3390/pathogens12060820
Chen, Andrew, Sun, Jiaman, Martin, Guillaume, Gray, Lesley-Ann, Hřibová, Eva, Christelová, Pavla, Yahiaoui, Nabila, Rounsley, Steve, Lyons, Rebecca, Batley, Jacqueline, Chen, Ning, Hamill, Sharon, Rai, Subash K., Coin, Lachlan, Uwimana, Brigitte, D’Hont, Angelique, Doležel, Jaroslav, Edwards, David, Swennen, Rony and Aitken, Elizabeth A. B. (2023). Identification of a major QTL-controlling resistance to the Subtropical Race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis. Pathogens, 12 (2) 289, 1-13. doi: 10.3390/pathogens12020289
Prasath, Duraisamy, Matthews, Andrea, O’Neill, Wayne T., Aitken, Elizabeth A. B. and Chen, Andrew (2023). Fusarium yellows of ginger (Zingiber officinale Roscoe) Caused by Fusarium oxysporum f. sp. zingiberi is associated with cultivar-specific expression of defense-responsive genes. Pathogens, 12 (1) 141, 141. doi: 10.3390/pathogens12010141
Shaw, Lindsay M., Li, Chengxia, Woods, Daniel P., Alvarez, Maria A., Lin, Huiqiong, Lau, Mei Y., Chen, Andrew and Dubcovsky, Jorge (2020). Epistatic interactions between PHOTOPERIOD1, CONSTANS1 and CONSTANS2 modulate the photoperiodic response in wheat. PLoS Genetics, 16 (7) e1008812, 1-28. doi: 10.1371/journal.pgen.1008812
Li, Chengxia, Lin, Huiqiong, Chen, Andrew, Lau, Meiyee, Jernstedt, Judy and Dubcovsky, Jorge (2019). Wheat VRN1, FUL2 and FUL3 play critical and redundant roles in spikelet development and spike determinacy. Development, 146 (14) dev175398, dev175398. doi: 10.1242/dev.175398
Chen, Andrew, Sun, Jiaman, Matthews, Andrea, Armas-Egas, Liz, Chen, Ning, Hamill, Sharon, Mintoff, Sharl, Tran-Nguyen, Lucy T. T., Batley, Jaqueline and Aitken, Elizabeth A. B. (2019). Assessing variations in host resistance to Fusarium oxysporum f sp. cubense race 4 in Musa species, with a focus on the subtropical race 4. Frontiers in Microbiology, 10 (MAY) 1062, 1062. doi: 10.3389/fmicb.2019.01062
Kippes, Nestor, Chen, Andrew, Zhang, Xiaoqin, Lukaszewski, Adam J. and Dubcovsky, Jorge (2018). Correction to: Development and characterization of a spring hexaploid wheat line with no functional VRN2 genes (Theoretical and Applied Genetics, (2016), 129, 7, (1417-1428), 10.1007/s00122-016-2713-3). Theoretical and Applied Genetics, 131 (10). doi: 10.1007/s00122-018-3141-3
Pearce, Stephen, Kippes, Nestor, Chen, Andrew, Debernardi, Juan Manuel and Dubcovsky, Jorge (2016). RNA-seq studies using wheat PHYTOCHROME B and PHYTOCHROME C mutants reveal shared and specific functions in the regulation of flowering and shade-avoidance pathways. BMC Plant Biology, 16 (1) 141, 1-19. doi: 10.1186/s12870-016-0831-3
Kippes, Nestor, Chen, Andrew, Zhang, Xiaoqin, Lukaszewski, Adam J. and Dubcovsky, Jorge (2016). Development and characterization of a spring hexaploid wheat line with no functional VRN2 genes. Theoretical and Applied Genetics, 129 (7), 1417-1428. doi: 10.1007/s00122-016-2713-3
Chen, Andrew, Li, Chengxia, Hu, Wei, Lau, Mei Yee, Lin, Huiqiong, Rockwell, Nathan C., Martin, Shelley S., Jernstedt, Judith A., Lagarias, J. Clark and Dubcovsky, Jorge (2014). PHYTOCHROME C plays a major role in the acceleration of wheat flowering under long-day photoperiod. Proceedings of the National Academy of Sciences of the United States of America, 111 (28), 10037-10044. doi: 10.1073/pnas.1409795111
Kippes, Nestor, Zhu, Jie, Chen, Andrew, Vanzetti, Leonardo, Lukaszewski, Adam, Nishida, Hidetaka, Kato, Kenji, Dvorak, Jan and Dubcovsky, Jorge (2014). Fine mapping and epistatic interactions of the vernalization gene VRN-D4 in hexaploid wheat. Molecular Genetics and Genomics, 289 (1), 47-62. doi: 10.1007/s00438-013-0788-y
Chen, Andrew and Dubcovsky, Jorge (2012). Wheat TILLING Mutants Show That the Vernalization Gene VRN1 Down-Regulates the Flowering Repressor VRN2 in Leaves but Is Not Essential for Flowering. PLoS Genetics, 8 (12) e1003134. doi: 10.1371/journal.pgen.1003134
Chen, Andrew, Gusta, Lawrence V., Brûlé-Babel, Anita, Leach, Richard, Baumann, Ute, Fincher, Geoffrey B. and Collins, Nicholas C. (2009). Varietal and chromosome 2H locus-specific frost tolerance in reproductive tissues of barley (Hordeum vulgare L.) detected using a frost simulation chamber. Theoretical and Applied Genetics, 119 (4), 685-694. doi: 10.1007/s00122-009-1079-1
Chen, Andrew, Reinheimer, Jason, Brûlé-Babel, Anita, Baumann, Ute, Pallotta, Margaret, Fincher, Geoffrey B. and Collins, Nicholas C. (2009). Genes and traits associated with chromosome 2H and 5H regions controlling sensitivity of reproductive tissues to frost in barley. Theoretical and Applied Genetics, 118 (8), 1465-1476. doi: 10.1007/s00122-009-0995-4
Chen, Andrew, Baumann, Ute, Fincher, Geoffrey B. and Collins, Nicholas C. (2009). Flt-2L, a locus in barley controlling flowering time, spike density, and plant height. Functional and Integrative Genomics, 9 (2), 243-254. doi: 10.1007/s10142-009-0114-2
Chen, Andrew, Brûlé-Babel, Anita, Baumann, Ute and Collins, Nicholas C. (2009). Structure-function analysis of the barley genome: The gene-rich region of chromosome 2HL. Functional and Integrative Genomics, 9 (1), 67-79. doi: 10.1007/s10142-008-0099-2